BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014A02LP1|AL426616
(646 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1688 948 0.0
>3x_Contig1688
Length = 18058
Score = 948 bits (462), Expect = 0.0
Identities = 587/644 (91%), Gaps = 5/644 (0%)
Strand = Plus / Minus
Query: 3 acgaacactgaatagctctttagtctgttgtcgtatatyatattctttgcatgttttatc 62
|||||||||||| |||||||||| |||||||||||||| |||| | ||||||||||||||
Sbjct: 13918 acgaacactgaaaagctctttagcctgttgtcgtatatcatataccttgcatgttttatc 13859
Query: 63 cttcgtaaattacagatagtaagtttccctgtttgggttggaatttcgtcgagatgatag 122
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13858 cttcg-aaattacagatagtaagtttccctgtttgggttggaatttcgtcgagatgatag 13800
Query: 123 tatgtttaaaaccaagcatggtggatacgcagctaccactacgcggatcccagaatattg 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 13799 tatgtttaaaaccaagcatggtggatacgcagctaccactacgcggatcccagaat-ttg 13741
Query: 183 awaagawtgtmtttggatcctgawacgawtaaacccatcttcggawgcmagtcgcatgat 242
| |||| ||| |||||||||||| |||| |||||||||||||||| || |||||||||||
Sbjct: 13740 ataagattgtctttggatcctgatacgattaaacccatcttcggatgccagtcgcatgat 13681
Query: 243 ttgamgwcccaatgawggcmtgatagcaccctttcttgttgtmcgttgctaaartwccat 302
|||| | |||||||| ||| |||||||||||||||||||||| |||||||||| | ||||
Sbjct: 13680 ttgacgtcccaatgatggcctgatagcaccctttcttgttgtccgttgctaaagttccat 13621
Query: 303 atwtwaaacacatwataataagaaaaamtgaaaaaattmtggttggtmggactaaacgat 362
|| | ||||||| || || |||| || ||| ||| || |||| ||| ||||||||||||
Sbjct: 13620 attttcaacacattatcatcagaacaactgacaaacttctggtcggtcggactaaacgat 13561
Query: 363 attwcccttacacattccatatgwgcttrgtccatgactttaaacatattaaagtttggt 422
||| ||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||
Sbjct: 13560 atttcccttacacattccatatgtgcttggtccatgactttaaccatattaaagtttggt 13501
Query: 423 tgchagatcttaarctcamcattagcgctaccactaamcaaacaawcascwgtatgtgag 482
||| ||||||||| ||| ||| |||||||||||||| || ||| | | |||||||||
Sbjct: 13500 tgccagatcttaagctccccatcagcgctaccactaaccatccaatcccctgtatgtgag 13441
Query: 483 tatgtmatcacaggtatacatgcaatatcatgagcctgcataatactttcgaaattgaaa 542
||||| ||||| ||| ||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 13440 tatgtcatcac-ggt-tac-tgcactatcatgagcctgcataatactttcgaaattgaaa 13384
Query: 543 ctggatccactccataatgaaaactctccattgtatgtagctaccactaaccttcttcct 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13383 ctggatccactccataatgaaaactctccattgtatgtagctaccactaaccttcttcct 13324
Query: 603 tctggcgtccacgtaagagccggaataacrtgctttaacttatt 646
||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 13323 tctggcgtccacgtaagagccggaataacgtgctttaccttatt 13280
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.35
Gapped
Lambda K H
1.42 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2652
Number of Sequences: 1807
Number of extensions: 2652
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 646
length of database: 10,358,551
effective HSP length: 16
effective length of query: 630
effective length of database: 10,329,639
effective search space: 6507672570
effective search space used: 6507672570
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.7 bits)
S1: 11 (23.0 bits)
S2: 49 (101.0 bits)